{"id":4485,"date":"2023-01-24T11:13:20","date_gmt":"2023-01-24T02:13:20","guid":{"rendered":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/?page_id=4485"},"modified":"2024-04-26T13:12:15","modified_gmt":"2024-04-26T04:12:15","slug":"software","status":"publish","type":"page","link":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/en\/system\/systembinfo\/software","title":{"rendered":"System B, ohtaka_Software"},"content":{"rendered":"<h2>Software configuration<\/h2>\r\n<h3>Compiler, Job Scheduler, Tools, etc.<\/h3>\r\n<table class=\"table table-bordered\">\r\n<tbody>\r\n<tr>\r\n<td>Intel Parallel Studio XE 2020 Cluster Edition<\/td>\r\n<\/tr>\r\n<tr>\r\n<td>AMD Optimizing C\/C++ Compiler<\/td>\r\n<\/tr>\r\n<tr>\r\n<td>ARM Forge<\/td>\r\n<\/tr>\r\n<tr>\r\n<td>Slurm Workload Manager<\/td>\r\n<\/tr>\r\n<\/tbody>\r\n<\/table>\r\n<p>&nbsp;<\/p>\r\n<h3>Materials science application software<\/h3>\r\n<p>The following software is preinstalled under \/home\/issp\/materiapps\/intel. Before execution, call xxxvar.sh (where xxx is the name of the software) under the software folder. <span>* denotes applications developed in the <\/span><a class=\"external-link\" href=\"http:\/\/www.pasums.issp.u-tokyo.ac.jp\/\" target=\"_blank\" rel=\"noopener\">Project for advancement of software usability in materials science (PASUMS)<\/a><span>, ** denotes relevant pre-installed software. *** denotes software that requires a paid license. Please click the link for more information about the software. Note that details on using the software are provided at the linked site. <\/span><\/p>\r\n<h4>Quantum lattice model solver<\/h4>\r\n<table class=\"table table-bordered\" style=\"width: 100%;\">\r\n<tbody>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"width: 9.746835443037975%; height: 21px;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-dcore\" rel=\"noopener\" target=\"_blank\">DCore<\/a>*<\/td>\r\n<td style=\"width: 89.24050632911393%;\"><span> Dynamical mean-field theory tools for quantum many-body systems<\/span><\/td>\r\n<\/tr>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"width: 9.746835443037975%; height: 21px;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-dsqss\" rel=\"noopener\" target=\"_blank\">DSQSS<\/a>*<\/td>\r\n<td style=\"width: 89.24050632911393%; height: 21px;\">Monte Carlo calculation program for quantum many-body lattice models<\/td>\r\n<\/tr>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"width: 9.746835443037975%; height: 21px;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-hphi\" rel=\"noopener\" target=\"_blank\">HPhi<\/a>*<\/td>\r\n<td style=\"width: 89.24050632911393%; height: 21px;\">Program package for ground states and finite temperature calculations in quantum lattice models using exact diagonalization and thermal pure quantum states<\/td>\r\n<\/tr>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"width: 9.746835443037975%; height: 21px;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-mvmc\" rel=\"noopener\" target=\"_blank\">mVMC<\/a>*<\/td>\r\n<td style=\"width: 89.24050632911393%; height: 21px;\">Many-variable variational Monte Carlo calculation program for general quantum lattice models<\/td>\r\n<\/tr>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"width: 9.746835443037975%; height: 21px;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-tenes\" rel=\"noopener\" target=\"_blank\">TeNeS<\/a>*<\/td>\r\n<td style=\"width: 89.24050632911393%; height: 21px;\">Ground-state solver for two-dimensional quantum lattice models using tensor network method<\/td>\r\n<\/tr>\r\n<\/tbody>\r\n<\/table>\r\n<p>&nbsp;<\/p>\r\n<h4>Software related to first principles calculation<\/h4>\r\n<table class=\"table table-bordered\" style=\"width: 99.7794%;\">\r\n<tbody>\r\n<tr>\r\n<td class=\"table-secondary\" style=\"width: 25.1506%;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/abics1\">abICS<\/a>*<\/td>\r\n<td style=\"width: 91.936%;\"><span>Software framework for performing configuration sampling in irregular systems<\/span><\/td>\r\n<\/tr>\r\n<tr>\r\n<td class=\"table-secondary\" style=\"width: 25.1506%;\"><a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/en\/system\/openmx_guide\">OpenMX<\/a>*<\/td>\r\n<td style=\"width: 91.936%;\"><span>First-principles calculation program using pseudopotentials and localized basis<\/span><\/td>\r\n<\/tr>\r\n<tr>\r\n<td class=\"table-secondary\" style=\"width: 25.1506%;\"><a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/en\/system\/quantum-espresso_guide\">Quantum ESPRESSO<\/a>**<\/td>\r\n<td style=\"width: 91.936%;\"><span>First-principles calculation library using pseudopotential method and plane wave basis<\/span><\/td>\r\n<\/tr>\r\n<tr>\r\n<td class=\"table-secondary\" style=\"width: 25.1506%;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-respack\" rel=\"noopener\" target=\"_blank\">RESPACK<\/a>*<\/td>\r\n<td style=\"width: 91.936%;\"><span>First-principles calculation software for evaluating interaction parameters of materials<\/span><\/td>\r\n<\/tr>\r\n<tr>\r\n<td class=\"table-secondary\" style=\"width: 25.1506%;\"><a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/?page_id=2945\" rel=\"noopener\" target=\"_blank\">VASP<\/a>***<\/td>\r\n<td style=\"width: 91.936%;\"><span>First-principles calculation software using plane wave basis and PAW pseudopotential<\/span><\/td>\r\n<\/tr>\r\n<tr>\r\n<td class=\"table-secondary\" style=\"width: 25.1506%;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-rism\" rel=\"noopener\" target=\"_blank\">ESM-RISM<\/a>*<\/td>\r\n<td style=\"width: 91.936%;\"><span>Software (using Quantum ESPRESSO) for describing the electronic states and reaction types of electrodes using density functional theory and analyzing the distribution of electrolytes using classical solution theory<\/span><\/td>\r\n<\/tr>\r\n<tr>\r\n<td class=\"table-secondary\" style=\"width: 25.1506%;\"><a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/en\/system\/salmon-guide\" rel=\"noopener\" target=\"_blank\">SALMON<\/a><\/td>\r\n<td style=\"width: 91.936%;\"><span>First-principles calculation software based on time dependent DFT<\/span><\/td>\r\n<\/tr>\r\n<\/tbody>\r\n<\/table>\r\n<h4><\/h4>\r\n<h4>Molecular Dynamics Software<\/h4>\r\n<table class=\"table table-bordered\">\r\n<tbody>\r\n<tr>\r\n<td class=\"table-secondary\"><a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/en\/system\/lammps_guide\">LAMMPS<\/a><\/td>\r\n<td>Software for classical molecular dynamics calculations<\/td>\r\n<\/tr>\r\n<\/tbody>\r\n<\/table>\r\n<h4>Miscellaneous (libraries, etc.)<\/h4>\r\n<table class=\"table table-bordered\" style=\"width: 99.2661%;\">\r\n<tbody>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"height: 21px; width: 10.9278%;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-physbo\"> PHYSBO<\/a>*<\/td>\r\n<td style=\"height: 21px; width: 141.649%;\"><span>Python library for fast, scalable Bayesian optimization<\/span><\/td>\r\n<\/tr>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"height: 21px; width: 10.9278%;\"><a href=\"https:\/\/www.pasums.issp.u-tokyo.ac.jp\/en\/usage-2dmat\"> 2DMAT<\/a>*<\/td>\r\n<td style=\"height: 21px; width: 141.649%;\"><span>A framework for applying search algorithms to sequential problem solvers to find optimal solutions<\/span><\/td>\r\n<\/tr>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"height: 21px; width: 10.9278%;\"><a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/system\/julia_guide\">Julia<\/a><\/td>\r\n<td style=\"height: 21px; width: 141.649%;\">Programming language for scientific and technical computing<\/td>\r\n<\/tr>\r\n<tr style=\"height: 21px;\">\r\n<td class=\"table-secondary\" style=\"height: 21px; width: 10.9278%;\"><a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/system\/python3_guide\">Python3<\/a><\/td>\r\n<td style=\"height: 21px; width: 141.649%;\"><span>High-level general-purpose scripting language<\/span><\/td>\r\n<\/tr>\r\n<\/tbody>\r\n<\/table>\r\n<p>&nbsp;<\/p>\r\n<h3>Regarding inquiries<\/h3>\r\n<p>Please <a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/en\/contact\/application\/\">click here<\/a> to submit a question about executing the above applications on the ISSP supercomputer system, etc.<\/p>\r\n<p>For information on how to use these applications (such as creating inputs) and their features, please contact each application&#8217;s developer.<\/p>\r\n<p>In addition, please use the <a href=\"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/en\/contact\/\">inquiry page<\/a> to contact us regarding instructions for using the ISSP supercomputer system and to report failures.<\/p>","protected":false},"excerpt":{"rendered":"Software configuration Compiler, Job Scheduler, Tools, etc. Intel Parallel Studio XE 2020 Cluster Edition AMD Optimizing C\/C++ Compiler ARM Forge Slurm Workload Manager &nbsp; Materials science application software The following software is preinstalled under \/home\/issp\/materiapps\/intel. Before execution, call xxxvar.sh (where xxx is the name of the software) under the software folder. * denotes applications developed [&hellip;]","protected":false},"author":1,"featured_media":0,"parent":4481,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-system.php","meta":{"_acf_changed":false,"_locale":"en_US","_original_post":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/?page_id=73","footnotes":""},"class_list":["post-4485","page","type-page","status-publish","hentry","en-US"],"acf":[],"_links":{"self":[{"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/pages\/4485","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/comments?post=4485"}],"version-history":[{"count":12,"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/pages\/4485\/revisions"}],"predecessor-version":[{"id":6147,"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/pages\/4485\/revisions\/6147"}],"up":[{"embeddable":true,"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/pages\/4481"}],"wp:attachment":[{"href":"https:\/\/mdcl.issp.u-tokyo.ac.jp\/scc\/wp-json\/wp\/v2\/media?parent=4485"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}